BioMCP

Qualified idgenomoncology/biomcp@1.0.0

Claude Code / Codex plugin and MCP server reaching ~30 biomedical data sources (PubMed, ClinVar, ClinicalTrials.gov, OncoKB, Reactome) via one CLI command grammar

Unsigned
Install

Overview

BioMCP is a single CLI binary and MCP server (GenomOncology) exposing one command grammar over roughly thirty trusted biomedical sources -- PubMed, ClinVar, ClinicalTrials.gov, OncoKB, Reactome, cBioPortal-style study data, and more -- for genes, variants, trials, articles, drugs, diseases, pathways, and proteins. Verified directly: the repository ships both .claude-plugin/plugin.json (a minimal manifest: name, description, version, author, embedded verbatim below) and a fuller .claude-plugin/marketplace.json (the install-time definition wiring the biomcp serve stdio MCP server), matching the documented install (/plugin marketplace add genomoncology/biomcp then /plugin install biomcp@biomcp) and a separately documented Codex path (codex mcp add biomcp -- biomcp serve). ClinVar is a concrete, nameable NCBI genomics/health data source, satisfying the relevance test directly rather than by vague health branding. Terms check: the repository's root LICENSE file (fetched directly) is the MIT License, matching the license field declared in marketplace.json. No slug collision against any existing entry in this registry.

Details

Licence
MIT
Version
1.0.0
Category
clinical-genomics
Homepage
https://biomcp.org
Repository
https://github.com/genomoncology/biomcp
Maintainers
Susheel Varma (@susheel, GA4GH AI Workstream / Sage Bionetworks)
Keywords
biomedicalclinvarpubmedclinical-trialsmcp-serverclaude-code-plugin

Publisher

Published by
GenomOncology (GitHub organisation) profile ↗
Upstream name
biomcp
Upstream version
1.0.0 (Manifest)

Safety classification

No safety classification has been submitted for this entry.

What the safety levels mean

Install

Run in Claude Code:

/plugin marketplace add genomoncology/biomcp
/plugin install biomcp@biomcp

Provenance

Created
Updated
Last verified