GA4GH AI RegistryAI Workstream

Skills

ga4gh-trs skill

Qualified idsusheel/ga4gh-plugins@0.1.0-rc.5

Read a GA4GH Tool Registry Service (TRS) registry: search registered bioinformatics tools (workflows and command-line tools), inspect one tool and its versions, and retrieve a version's descriptor, se

Unsigned
View upstream

Overview

Bundled Claude Code / MCP skill for GA4GH Tool Registry Service (TRS), shipped alongside the dsh-ga4gh-trs Cordis plugin and standalone MCP server in the ga4gh-plugins monorepo. Read a GA4GH Tool Registry Service (TRS) registry: search registered bioinformatics tools (workflows and command-line tools), inspect one tool and its versions, and retrieve a version's descriptor, secondary descriptor files, test parameter files, file listing, and container build recipes. Use when the user asks to find a registered CWL/WDL/Nextflow tool or workflow, look up a tool's versions or descriptor types, or fetch a registered workflow's source or tests.

Details

Licence
MIT
Version
0.1.0-rc.5
Category
Other genomic or health research use case
Homepage
https://github.com/susheel/ga4gh-plugins/tree/main/packages/trs
Repository
https://github.com/susheel/ga4gh-plugins
Maintainers
Susheel Varma (@susheel, GA4GH AI Workstream / Sage Bionetworks)
Keywords
ga4ghtrscordis-pluginmcp-server
GA4GH standards
trs

Publisher

Published by
Susheel Varma (GitHub user) profile ↗
Upstream name
ga4gh-plugins
Upstream version
0.1.0-rc.5 (Git tag)
Version date

Safety classification

No safety classification has been submitted for this entry.

What the safety levels mean

Skill

Human oversight
recommended
Provenance logging
No
Evaluation criteria
https://github.com/susheel/ga4gh-plugins/blob/main/packages/trs/EVALUATION-CRITERIA.md
Source
https://github.com/susheel/ga4gh-plugins.git (packages/trs)

Inputs

  • endpoint_url (string) — Base URL of the configured endpoint to query.
  • query_parameters (object) — Standard-specific filter, search, or lookup parameters; see the skill's own tool table.

Outputs

  • result (object) — Structured response from the queried endpoint, per the standard's own schema, unmodified.

Provenance

Created
Updated
Last verified