ga4gh-trs skill

Read a GA4GH Tool Registry Service (TRS) registry: search registered bioinformatics tools (workflows and command-line tools), inspect one tool and its versions, and retrieve a version's descriptor, se

Unsigned

Overview

Bundled Claude Code / MCP skill for GA4GH Tool Registry Service (TRS), shipped alongside the `@deepseek-ai/dsh-ga4gh-trs` Cordis plugin and standalone MCP server in the `ga4gh-plugins` monorepo. Read a GA4GH Tool Registry Service (TRS) registry: search registered bioinformatics tools (workflows and command-line tools), inspect one tool and its versions, and retrieve a version's descriptor, secondary descriptor files, test parameter files, file listing, and container build recipes. Use when the user asks to find a registered CWL/WDL/Nextflow tool or workflow, look up a tool's versions or descriptor types, or fetch a registered workflow's source or tests.

Details

Licence: MIT
Version: 0.1.0-rc.5
Category: Other genomic or health research use case
Homepage: https://github.com/susheel/ga4gh-plugins/tree/main/packages/trs
Repository: https://github.com/susheel/ga4gh-plugins
Maintainers: Susheel Varma (@susheel, GA4GH AI Workstream / Sage Bionetworks)
Keywords: ga4ghtrscordis-pluginmcp-server
GA4GH standards: trs

Safety classification

No safety classification has been submitted for this entry.

Skill

Human oversight: recommended
Provenance logging: No
Evaluation criteria: https://github.com/susheel/ga4gh-plugins/blob/main/packages/trs/EVALUATION-CRITERIA.md
Source: https://github.com/susheel/ga4gh-plugins.git (packages/trs)

Inputs

endpoint_url (string) — Base URL of the configured endpoint to query.
query_parameters (object) — Standard-specific filter, search, or lookup parameters; see the skill's own tool table.

Outputs

result (object) — Structured response from the queried endpoint, per the standard's own schema, unmodified.

Provenance

Created: 2026-09-04T11:00:07.661Z
Updated: 2026-09-04T11:00:07.661Z
Last verified: 2026-09-04T11:00:07.661Z